Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CCL4P13236 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 KRT223P-202ENST00000449164 1292 ntBASIC15.16■□□□□ 0.02
CCL4P13236 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL4P13236 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.16■□□□□ 0.02
CCL4P13236 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL4P13236 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.16■□□□□ 0.02
CCL4P13236 BTNL10-201ENST00000595971 695 ntBASIC15.16■□□□□ 0.02
CCL4P13236 AC133552.6-201ENST00000613406 534 ntBASIC15.16■□□□□ 0.02
CCL4P13236 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCL4P13236 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL4P13236 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL4P13236 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCL4P13236 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 ANKRD19P-201ENST00000338192 862 ntBASIC15.15■□□□□ 0.02
CCL4P13236 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCL4P13236 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL4P13236 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL4P13236 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL4P13236 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL4P13236 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL4P13236 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL4P13236 AP005482.1-201ENST00000563722 1273 ntBASIC15.15■□□□□ 0.02
CCL4P13236 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.15■□□□□ 0.02
CCL4P13236 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCL4P13236 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL4P13236 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
CCL4P13236 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 ALOX12P2-203ENST00000570921 1945 ntBASIC15.14■□□□□ 0.01
CCL4P13236 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CCL4P13236 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL4P13236 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL4P13236 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CCL4P13236 AC245100.5-201ENST00000452108 331 ntBASIC15.14■□□□□ 0.01
CCL4P13236 USP32P1-208ENST00000506594 1164 ntBASIC15.14■□□□□ 0.01
CCL4P13236 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL4P13236 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms