Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AP003680.1-201ENST00000598970 3660 ntBASIC17■□□□□ 0.31
RARAP10276 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17■□□□□ 0.31
RARAP10276 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RARAP10276 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17■□□□□ 0.31
RARAP10276 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17■□□□□ 0.31
RARAP10276 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RARAP10276 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17■□□□□ 0.31
RARAP10276 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 POLD2P1-201ENST00000511220 997 ntBASIC17■□□□□ 0.31
RARAP10276 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17■□□□□ 0.31
RARAP10276 KRT18P58-201ENST00000527480 1120 ntBASIC17■□□□□ 0.31
RARAP10276 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17■□□□□ 0.31
RARAP10276 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17■□□□□ 0.31
RARAP10276 AC091812.2-201ENST00000619081 385 ntBASIC17■□□□□ 0.31
RARAP10276 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17■□□□□ 0.31
RARAP10276 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17■□□□□ 0.31
RARAP10276 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17■□□□□ 0.31
RARAP10276 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17■□□□□ 0.31
RARAP10276 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17■□□□□ 0.31
RARAP10276 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RARAP10276 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RARAP10276 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.99■□□□□ 0.31
RARAP10276 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.99■□□□□ 0.31
RARAP10276 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 PRYP6-201ENST00000514804 343 ntBASIC16.99■□□□□ 0.31
RARAP10276 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.99■□□□□ 0.31
RARAP10276 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 AC040169.1-201ENST00000565382 521 ntBASIC16.99■□□□□ 0.31
RARAP10276 RARRES2P8-201ENST00000566335 367 ntBASIC16.99■□□□□ 0.31
RARAP10276 AL138918.1-201ENST00000568306 659 ntBASIC16.99■□□□□ 0.31
RARAP10276 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.99■□□□□ 0.31
RARAP10276 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RARAP10276 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RARAP10276 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RARAP10276 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RARAP10276 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RARAP10276 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RARAP10276 AL589702.1-201ENST00000641229 1509 ntBASIC16.98■□□□□ 0.31
RARAP10276 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 AC002347.1-201ENST00000569543 541 ntBASIC16.98■□□□□ 0.31
RARAP10276 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.98■□□□□ 0.31
RARAP10276 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 AL671883.3-201ENST00000603274 991 ntBASIC16.98■□□□□ 0.31
RARAP10276 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.98■□□□□ 0.31
RARAP10276 AC092902.6-201ENST00000641783 218 ntBASIC16.98■□□□□ 0.31
RARAP10276 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms