Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 RBM17P3-201ENST00000417687 1192 ntBASIC17.54■□□□□ 0.4
CCDC175P0C221 KRT16P4-201ENST00000453883 522 ntBASIC17.54■□□□□ 0.4
CCDC175P0C221 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC175P0C221 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC175P0C221 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC175P0C221 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC175P0C221 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CCDC175P0C221 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC175P0C221 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC175P0C221 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC175P0C221 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.53■□□□□ 0.4
CCDC175P0C221 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC175P0C221 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC175P0C221 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC175P0C221 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC175P0C221 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC175P0C221 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC175P0C221 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC175P0C221 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC175P0C221 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC175P0C221 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC175P0C221 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC175P0C221 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC175P0C221 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC175P0C221 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 TMPOP1-202ENST00000424642 1267 ntBASIC17.52■□□□□ 0.4
CCDC175P0C221 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC175P0C221 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC175P0C221 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC175P0C221 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC175P0C221 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC175P0C221 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC175P0C221 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.52■□□□□ 0.4
CCDC175P0C221 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC175P0C221 TCAF2P1-201ENST00000291129 2421 ntBASIC17.52■□□□□ 0.4
CCDC175P0C221 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC175P0C221 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC175P0C221 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC175P0C221 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC175P0C221 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC175P0C221 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC175P0C221 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC175P0C221 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC175P0C221 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC175P0C221 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC175P0C221 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
CCDC175P0C221 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC175P0C221 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC175P0C221 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC175P0C221 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC175P0C221 AC011477.6-201ENST00000604980 1927 ntBASIC17.51■□□□□ 0.39
CCDC175P0C221 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC175P0C221 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms