Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 AGGF1P2-201ENST00000426656 2106 ntBASIC15.19■□□□□ 0.02
PDGFAP04085 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDGFAP04085 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PDGFAP04085 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PDGFAP04085 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFAP04085 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFAP04085 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFAP04085 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDGFAP04085 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.19■□□□□ 0.02
PDGFAP04085 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.19■□□□□ 0.02
PDGFAP04085 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 GNAQP1-201ENST00000444815 1067 ntBASIC15.19■□□□□ 0.02
PDGFAP04085 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.19■□□□□ 0.02
PDGFAP04085 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFAP04085 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 HILS1-202ENST00000545329 423 ntBASIC15.19■□□□□ 0.02
PDGFAP04085 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
PDGFAP04085 BANF1P1-201ENST00000553684 263 ntBASIC15.19■□□□□ 0.02
PDGFAP04085 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.19■□□□□ 0.02
PDGFAP04085 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.19■□□□□ 0.02
PDGFAP04085 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.19■□□□□ 0.02
PDGFAP04085 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PDGFAP04085 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.18■□□□□ 0.02
PDGFAP04085 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.18■□□□□ 0.02
PDGFAP04085 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PDGFAP04085 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PDGFAP04085 AC010336.2-201ENST00000564226 506 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 AL589739.1-201ENST00000607720 493 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.18■□□□□ 0.02
PDGFAP04085 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 AC007950.2-201ENST00000615045 2347 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 AC138969.3-201ENST00000546612 1459 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 AC138932.2-201ENST00000548268 1459 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 AC126755.4-201ENST00000549796 1459 ntBASIC15.18■□□□□ 0.02
PDGFAP04085 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
PDGFAP04085 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFAP04085 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.17■□□□□ 0.02
PDGFAP04085 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 CETN4P-206ENST00000642099 2168 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms