Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
UPK1BO75841 NEK4P2-201ENST00000580004 1012 ntBASIC14.13□□□□□ -0.15
UPK1BO75841 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.13□□□□□ -0.15
UPK1BO75841 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
UPK1BO75841 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.12□□□□□ -0.15
UPK1BO75841 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.12□□□□□ -0.15
UPK1BO75841 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 AC010653.2-201ENST00000623505 997 ntBASIC14.12□□□□□ -0.15
UPK1BO75841 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK1BO75841 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
UPK1BO75841 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK1BO75841 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 AL359881.3-201ENST00000602640 1721 ntBASIC14.12□□□□□ -0.15
UPK1BO75841 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1BO75841 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UPK1BO75841 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 AC092135.3-201ENST00000624151 1846 ntBASIC14.11□□□□□ -0.15
UPK1BO75841 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 CR383656.2-201ENST00000548656 2254 ntBASIC14.11□□□□□ -0.15
UPK1BO75841 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.11□□□□□ -0.15
UPK1BO75841 IGHGP-201ENST00000390555 1178 ntBASIC14.11□□□□□ -0.15
UPK1BO75841 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK1BO75841 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK1BO75841 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK1BO75841 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms