Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYNGR3O43761 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SYNGR3O43761 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SYNGR3O43761 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.12□□□□□ -0.15
SYNGR3O43761 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYNGR3O43761 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.11□□□□□ -0.15
SYNGR3O43761 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SYNGR3O43761 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.11□□□□□ -0.15
SYNGR3O43761 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.11□□□□□ -0.15
SYNGR3O43761 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 RNA5SP410-201ENST00000516285 106 ntBASIC14.11□□□□□ -0.15
SYNGR3O43761 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.11□□□□□ -0.15
SYNGR3O43761 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.11□□□□□ -0.15
SYNGR3O43761 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.11□□□□□ -0.15
SYNGR3O43761 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 AP001282.1-201ENST00000531301 1499 ntBASIC14.11□□□□□ -0.15
SYNGR3O43761 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.11□□□□□ -0.15
SYNGR3O43761 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.11□□□□□ -0.15
SYNGR3O43761 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYNGR3O43761 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.1□□□□□ -0.15
SYNGR3O43761 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SYNGR3O43761 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SYNGR3O43761 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SYNGR3O43761 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.1□□□□□ -0.15
SYNGR3O43761 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.1□□□□□ -0.15
SYNGR3O43761 AP005117.1-202ENST00000581724 1908 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.1□□□□□ -0.15
SYNGR3O43761 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SYNGR3O43761 HLA-H-201ENST00000383620 1096 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SYNGR3O43761 FAM58DP-201ENST00000428076 619 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 RBPMS2P1-201ENST00000437762 623 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.1□□□□□ -0.15
SYNGR3O43761 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.1□□□□□ -0.15
SYNGR3O43761 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.1□□□□□ -0.15
SYNGR3O43761 AC109322.1-201ENST00000524499 1264 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 RFPL4AP1-201ENST00000530883 850 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.1□□□□□ -0.15
SYNGR3O43761 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 AP001059.3-201ENST00000619053 235 ntBASIC14.1□□□□□ -0.15
SYNGR3O43761 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.1□□□□□ -0.15
SYNGR3O43761 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SYNGR3O43761 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.1□□□□□ -0.15
SYNGR3O43761 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms