Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 AC009407.1-201ENST00000568958 598 ntBASIC17.02■□□□□ 0.32
CLDN5O00501 MIR4745-201ENST00000577608 62 ntBASIC17.02■□□□□ 0.32
CLDN5O00501 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.02■□□□□ 0.31
CLDN5O00501 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.02■□□□□ 0.31
CLDN5O00501 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CLDN5O00501 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLDN5O00501 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
CLDN5O00501 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.02■□□□□ 0.31
CLDN5O00501 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CLDN5O00501 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN5O00501 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CLDN5O00501 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN5O00501 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN5O00501 HAUS4P1-201ENST00000406739 1145 ntBASIC17.01■□□□□ 0.31
CLDN5O00501 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN5O00501 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN5O00501 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN5O00501 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN5O00501 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN5O00501 AC010336.2-201ENST00000564226 506 ntBASIC17.01■□□□□ 0.31
CLDN5O00501 AC008738.7-201ENST00000609744 511 ntBASIC17.01■□□□□ 0.31
CLDN5O00501 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN5O00501 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 AC022144.1-201ENST00000602255 1580 ntBASIC17.01■□□□□ 0.31
CLDN5O00501 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN5O00501 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN5O00501 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN5O00501 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN5O00501 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17■□□□□ 0.31
CLDN5O00501 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17■□□□□ 0.31
CLDN5O00501 AC124067.4-201ENST00000519691 2379 ntBASIC17■□□□□ 0.31
CLDN5O00501 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17■□□□□ 0.31
CLDN5O00501 AC009477.1-201ENST00000452936 217 ntBASIC17■□□□□ 0.31
CLDN5O00501 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17■□□□□ 0.31
CLDN5O00501 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17■□□□□ 0.31
CLDN5O00501 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17■□□□□ 0.31
CLDN5O00501 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CLDN5O00501 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17■□□□□ 0.31
CLDN5O00501 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CLDN5O00501 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17■□□□□ 0.31
CLDN5O00501 AL033527.5-202ENST00000641632 1098 ntBASIC17■□□□□ 0.31
CLDN5O00501 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLDN5O00501 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN5O00501 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN5O00501 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN5O00501 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN5O00501 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN5O00501 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms