Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC188H7C350 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 AP001282.1-201ENST00000531301 1499 ntBASIC16.86■□□□□ 0.29
CCDC188H7C350 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC188H7C350 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 MRPL20P1-201ENST00000400819 433 ntBASIC16.85■□□□□ 0.29
CCDC188H7C350 HMGA1P7-201ENST00000406908 502 ntBASIC16.85■□□□□ 0.29
CCDC188H7C350 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC188H7C350 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 AP002469.2-201ENST00000531724 424 ntBASIC16.85■□□□□ 0.29
CCDC188H7C350 ACTL9-202ENST00000612068 1252 ntBASIC16.85■□□□□ 0.29
CCDC188H7C350 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC188H7C350 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC188H7C350 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
CCDC188H7C350 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC188H7C350 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC188H7C350 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CCDC188H7C350 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC188H7C350 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC188H7C350 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.84■□□□□ 0.29
CCDC188H7C350 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC188H7C350 FAM185BP-201ENST00000443595 716 ntBASIC16.84■□□□□ 0.29
CCDC188H7C350 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC188H7C350 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC188H7C350 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.84■□□□□ 0.29
CCDC188H7C350 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC188H7C350 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC188H7C350 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC188H7C350 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC188H7C350 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC188H7C350 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC188H7C350 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC188H7C350 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CCDC188H7C350 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC188H7C350 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
CCDC188H7C350 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms