Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AC004890.2-204ENST00000481968 304 ntBASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AL118508.1-201ENST00000613502 2345 ntBASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AL035456.1-201ENST00000456064 1369 ntBASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC015922.1-201ENST00000421102 1152 ntBASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AL589739.1-201ENST00000607720 493 ntBASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA3F8WFD2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 ME2P1-201ENST00000426028 1970 ntBASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms