Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC022145.2-201ENST00000598203 171 ntBASIC16.22■□□□□ 0.19
CFAP99D6REC4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.22■□□□□ 0.19
CFAP99D6REC4 AC004835.2-201ENST00000603762 682 ntBASIC16.22■□□□□ 0.19
CFAP99D6REC4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CFAP99D6REC4 AL513210.1-201ENST00000629608 234 ntBASIC16.22■□□□□ 0.19
CFAP99D6REC4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 AC132872.4-202ENST00000622924 2756 ntBASIC16.22■□□□□ 0.19
CFAP99D6REC4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CFAP99D6REC4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CFAP99D6REC4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.22■□□□□ 0.19
CFAP99D6REC4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFAP99D6REC4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CFAP99D6REC4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 UXT-AS1-201ENST00000590504 1525 ntBASIC16.21■□□□□ 0.19
CFAP99D6REC4 AC068587.6-202ENST00000641839 5619 ntBASIC16.21■□□□□ 0.19
CFAP99D6REC4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 AC005237.2-201ENST00000434368 219 ntBASIC16.21■□□□□ 0.19
CFAP99D6REC4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFAP99D6REC4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CFAP99D6REC4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CFAP99D6REC4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 AC254562.1-201ENST00000417586 456 ntBASIC16.2■□□□□ 0.18
CFAP99D6REC4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 AP006288.1-201ENST00000446065 395 ntBASIC16.2■□□□□ 0.18
CFAP99D6REC4 AC098859.1-201ENST00000502915 1238 ntBASIC16.2■□□□□ 0.18
CFAP99D6REC4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 SNHG9-202ENST00000564014 471 ntBASIC16.2■□□□□ 0.18
CFAP99D6REC4 AL138918.1-201ENST00000568306 659 ntBASIC16.2■□□□□ 0.18
CFAP99D6REC4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFAP99D6REC4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.2■□□□□ 0.18
CFAP99D6REC4 AL365330.1-201ENST00000607459 531 ntBASIC16.2■□□□□ 0.18
CFAP99D6REC4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms