Protein–RNA interactions for Protein: B9A6J9

TBC1D3L, TBC1 domain family member 3L, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3LB9A6J9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3LB9A6J9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3LB9A6J9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3LB9A6J9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3LB9A6J9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TBC1D3LB9A6J9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC005052.1-201ENST00000625181 2492 ntBASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC079328.2-201ENST00000561241 3354 ntBASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC098614.1-201ENST00000368528 745 ntBASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AC004790.1-201ENST00000612686 536 ntBASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3LB9A6J9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 AL691432.1-201ENST00000596308 1422 ntBASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 SLC7A15P-201ENST00000424028 1363 ntBASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 MEP1AP4-201ENST00000423244 1087 ntBASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 AC008494.3-201ENST00000606615 944 ntBASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3LB9A6J9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3LB9A6J9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3LB9A6J9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TBC1D3LB9A6J9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3LB9A6J9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms