Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RCCD1A6NED2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCCD1A6NED2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 C18orf15-201ENST00000623680 2534 ntBASIC17.21■□□□□ 0.35
RCCD1A6NED2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC245100.5-201ENST00000452108 331 ntBASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC092910.1-201ENST00000482027 1129 ntBASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC108751.1-201ENST00000490852 363 ntBASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AL078644.1-201ENST00000609881 752 ntBASIC17.21■□□□□ 0.35
RCCD1A6NED2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCCD1A6NED2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.21■□□□□ 0.35
RCCD1A6NED2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RCCD1A6NED2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RCCD1A6NED2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RCCD1A6NED2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RCCD1A6NED2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.21■□□□□ 0.34
RCCD1A6NED2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.21■□□□□ 0.34
RCCD1A6NED2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RCCD1A6NED2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.21■□□□□ 0.34
RCCD1A6NED2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RCCD1A6NED2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 AC092474.2-201ENST00000424288 719 ntBASIC17.2■□□□□ 0.34
RCCD1A6NED2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 AC109635.5-201ENST00000533593 962 ntBASIC17.2■□□□□ 0.34
RCCD1A6NED2 AL121912.1-201ENST00000603683 238 ntBASIC17.2■□□□□ 0.34
RCCD1A6NED2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCCD1A6NED2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.2■□□□□ 0.34
RCCD1A6NED2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms