Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AC069148.1-201ENST00000608741 768 ntBASIC17.35■□□□□ 0.37
CTAGE9A4FU28 AL589182.2-201ENST00000619332 1049 ntBASIC17.35■□□□□ 0.37
CTAGE9A4FU28 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 AC007292.2-201ENST00000593524 1812 ntBASIC17.35■□□□□ 0.37
CTAGE9A4FU28 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTAGE9A4FU28 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 SLC25A6P2-201ENST00000497974 877 ntBASIC17.34■□□□□ 0.37
CTAGE9A4FU28 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 AP000867.3-201ENST00000524675 377 ntBASIC17.34■□□□□ 0.37
CTAGE9A4FU28 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 AP005117.1-201ENST00000584346 1413 ntBASIC17.34■□□□□ 0.37
CTAGE9A4FU28 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 PI4KAP1-204ENST00000612579 1703 ntBASIC17.34■□□□□ 0.37
CTAGE9A4FU28 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTAGE9A4FU28 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 LINC01101-201ENST00000622953 1884 ntBASIC17.33■□□□□ 0.37
CTAGE9A4FU28 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.33■□□□□ 0.37
CTAGE9A4FU28 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 HCG4-201ENST00000418983 998 ntBASIC17.33■□□□□ 0.36
CTAGE9A4FU28 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 MIR5100-201ENST00000579544 119 ntBASIC17.33■□□□□ 0.36
CTAGE9A4FU28 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 AC091076.1-201ENST00000610741 619 ntBASIC17.33■□□□□ 0.36
CTAGE9A4FU28 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CTAGE9A4FU28 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms