Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC007389.4-201ENST00000454674 793 ntBASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 PCDHA12-202ENST00000613593 2588 ntBASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC008735.3-201ENST00000596646 500 ntBASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC144AA2RUR9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 AL607033.1-201ENST00000623900 1599 ntBASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC144AA2RUR9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 FAM86LP-201ENST00000478302 853 ntBASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 AC010319.3-201ENST00000597028 470 ntBASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 AL033527.5-201ENST00000641382 801 ntBASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC144AA2RUR9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms