Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 LINC02199-201ENST00000506655 2702 ntBASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 AC005225.4-201ENST00000557330 545 ntBASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 HYMAI-201ENST00000635591 3347 ntBASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 AL118508.1-201ENST00000613502 2345 ntBASIC16.61■□□□□ 0.25
FNDC3AQ9Y2H6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 GGT4P-201ENST00000623672 1708 ntBASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 HLA-J-202ENST00000469281 1241 ntBASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 KRT8P23-201ENST00000560090 1207 ntBASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 AL139011.1-202ENST00000642063 584 ntBASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC3AQ9Y2H6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms