Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 HLA-H-201ENST00000383620 1096 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 KRT18P13-201ENST00000400056 1290 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AC211486.1-202ENST00000416371 468 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AC211476.1-201ENST00000503899 468 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AC007950.2-201ENST00000615045 2347 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4E1Q9UPM8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AL627223.1-201ENST00000416693 442 ntBASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 KRT18P32-201ENST00000424695 1287 ntBASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AC055717.3-201ENST00000622967 595 ntBASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4E1Q9UPM8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 AC093520.2-201ENST00000561830 333 ntBASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP4E1Q9UPM8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms