Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 ELK2BP-201ENST00000415014 1224 ntBASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 AC073648.2-201ENST00000510116 352 ntBASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 AC025062.2-201ENST00000605477 670 ntBASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 AL512652.2-201ENST00000625156 1716 ntBASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGB4Q9UN71 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 SNX33P1-201ENST00000592116 1762 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 RPS15P9-201ENST00000494093 319 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 OR7E14P-202ENST00000530490 1290 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AC087641.1-201ENST00000557561 1021 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AC005412.3-201ENST00000580309 715 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 MIR1199-201ENST00000621445 119 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AL031731.1-201ENST00000642131 2094 ntBASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB4Q9UN71 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 FAM45BP-202ENST00000592932 1624 ntBASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 AP005117.1-202ENST00000581724 1908 ntBASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 HCG4-201ENST00000418983 998 ntBASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 SLC25A6P2-201ENST00000497974 877 ntBASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 AF238378.1-201ENST00000526806 358 ntBASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 CYP2A7P1-201ENST00000595391 815 ntBASIC15.77■□□□□ 0.12
PCDHGB4Q9UN71 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms