Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 AC026979.3-201ENST00000607315 403 ntBASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
PDLIM7Q9NR12 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PDLIM7Q9NR12 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PDLIM7Q9NR12 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PDLIM7Q9NR12 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 AC018665.1-201ENST00000622927 1362 ntBASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 AC093525.8-201ENST00000624099 1342 ntBASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 CLK3P2-201ENST00000427566 1453 ntBASIC17.95■□□□□ 0.46
PDLIM7Q9NR12 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 AC020907.1-201ENST00000616460 1350 ntBASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 CTBP2P5-201ENST00000454986 1264 ntBASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM7Q9NR12 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 PDIA3P1-201ENST00000471856 1510 ntBASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 AL136982.4-201ENST00000437689 1740 ntBASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM7Q9NR12 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms