Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NECTIN3Q9NQS3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 KRT8P48-201ENST00000515599 1220 ntBASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AL135744.1-201ENST00000565098 629 ntBASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AC026120.1-201ENST00000611536 926 ntBASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 WASH6P-202ENST00000359512 1437 ntBASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NECTIN3Q9NQS3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 DBET-201ENST00000630918 3363 ntBASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.58■□□□□ 0.09
NECTIN3Q9NQS3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 AP006288.1-201ENST00000446065 395 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 DNAJB3-202ENST00000449667 1266 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 HLA-J-202ENST00000469281 1241 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 AL596442.2-201ENST00000610240 980 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 AC105339.1-204ENST00000636249 355 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 LINC02228-204ENST00000642115 2962 ntBASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NECTIN3Q9NQS3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NECTIN3Q9NQS3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms