Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AC007967.4-201ENST00000614700 386 ntBASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 AC068418.2-201ENST00000577309 3703 ntBASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSBP3Q9BWW4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AL589702.1-201ENST00000641229 1509 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 TREML5P-201ENST00000421694 576 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 BASP1P1-201ENST00000430708 665 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 RNA5SP421-201ENST00000516864 134 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AC005498.2-205ENST00000593218 784 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AL158211.3-201ENST00000607385 239 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AL035456.1-201ENST00000456064 1369 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 AL596257.1-201ENST00000641463 2694 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 U82695.1-201ENST00000635752 1889 ntBASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SSBP3Q9BWW4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PCDHA1-201ENST00000378133 2726 ntBASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC055876.3-201ENST00000431496 288 ntBASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 AC138649.4-201ENST00000612222 287 ntBASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSBP3Q9BWW4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms