Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 KRT43P-201ENST00000434019 910 ntBASIC16.42■□□□□ 0.22
NOTCH4Q99466 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 AP001889.1-201ENST00000525414 633 ntBASIC16.42■□□□□ 0.22
NOTCH4Q99466 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 AC009542.2-202ENST00000619004 1067 ntBASIC16.42■□□□□ 0.22
NOTCH4Q99466 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.42■□□□□ 0.22
NOTCH4Q99466 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NOTCH4Q99466 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.42■□□□□ 0.22
NOTCH4Q99466 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 FO681548.1-201ENST00000455617 1132 ntBASIC16.41■□□□□ 0.22
NOTCH4Q99466 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 BCYRN1-201ENST00000418539 200 ntBASIC16.41■□□□□ 0.22
NOTCH4Q99466 FAM21FP-201ENST00000426241 1131 ntBASIC16.41■□□□□ 0.22
NOTCH4Q99466 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 AP000812.2-201ENST00000538934 718 ntBASIC16.41■□□□□ 0.22
NOTCH4Q99466 KRT90P-201ENST00000549264 1064 ntBASIC16.41■□□□□ 0.22
NOTCH4Q99466 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 MIR6787-201ENST00000616675 61 ntBASIC16.41■□□□□ 0.22
NOTCH4Q99466 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NOTCH4Q99466 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.41■□□□□ 0.22
NOTCH4Q99466 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 KRT18P43-201ENST00000469825 1281 ntBASIC16.4■□□□□ 0.22
NOTCH4Q99466 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 MIR6869-201ENST00000619434 62 ntBASIC16.4■□□□□ 0.22
NOTCH4Q99466 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NOTCH4Q99466 AL133267.1-201ENST00000398220 340 ntBASIC16.4■□□□□ 0.22
NOTCH4Q99466 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NOTCH4Q99466 ACTBP11-201ENST00000436287 1126 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms