Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 HLA-H-201ENST00000383620 1096 ntBASIC19.16■□□□□ 0.66
NEK1Q96PY6 AC004461.1-201ENST00000412461 403 ntBASIC19.16■□□□□ 0.66
NEK1Q96PY6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 AP3S2-216ENST00000617003 1561 ntBASIC19.15■□□□□ 0.66
NEK1Q96PY6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 AC134407.2-201ENST00000625089 1978 ntBASIC19.15■□□□□ 0.66
NEK1Q96PY6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEK1Q96PY6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 AP001282.1-201ENST00000531301 1499 ntBASIC19.15■□□□□ 0.66
NEK1Q96PY6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.15■□□□□ 0.66
NEK1Q96PY6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NEK1Q96PY6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
NEK1Q96PY6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.14■□□□□ 0.66
NEK1Q96PY6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NEK1Q96PY6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NEK1Q96PY6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NEK1Q96PY6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
NEK1Q96PY6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NEK1Q96PY6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 AC005237.2-201ENST00000434368 219 ntBASIC19.14■□□□□ 0.65
NEK1Q96PY6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 AC093520.2-201ENST00000561830 333 ntBASIC19.14■□□□□ 0.65
NEK1Q96PY6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 PRAL-201ENST00000624952 3286 ntBASIC19.14■□□□□ 0.65
NEK1Q96PY6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEK1Q96PY6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NEK1Q96PY6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms