Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 AC113347.1-201ENST00000413321 391 ntBASIC12.33□□□□□ -0.44
AP1S3Q96PC3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 RNF152P1-201ENST00000397754 604 ntBASIC12.32□□□□□ -0.44
AP1S3Q96PC3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC087499.1-201ENST00000418141 1075 ntBASIC12.32□□□□□ -0.44
AP1S3Q96PC3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC009533.2-201ENST00000543664 586 ntBASIC12.32□□□□□ -0.44
AP1S3Q96PC3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC090616.6-201ENST00000582640 721 ntBASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC005363.2-201ENST00000618631 242 ntBASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC124864.1-201ENST00000623408 392 ntBASIC12.32□□□□□ -0.44
AP1S3Q96PC3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms