Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 AC093214.1-201ENST00000511688 1107 ntBASIC19.27■□□□□ 0.68
DDX11Q96FC9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 AC069262.1-201ENST00000539058 672 ntBASIC19.27■□□□□ 0.68
DDX11Q96FC9 AL512356.2-201ENST00000546955 174 ntBASIC19.27■□□□□ 0.68
DDX11Q96FC9 KRT8P23-201ENST00000560090 1207 ntBASIC19.27■□□□□ 0.68
DDX11Q96FC9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX11Q96FC9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX11Q96FC9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX11Q96FC9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX11Q96FC9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX11Q96FC9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
DDX11Q96FC9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX11Q96FC9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX11Q96FC9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX11Q96FC9 AC010491.1-201ENST00000563101 2797 ntBASIC19.27■□□□□ 0.67
DDX11Q96FC9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX11Q96FC9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 AC024909.3-201ENST00000611513 2257 ntBASIC19.26■□□□□ 0.67
DDX11Q96FC9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX11Q96FC9 WASH6P-202ENST00000359512 1437 ntBASIC19.25■□□□□ 0.67
DDX11Q96FC9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 AL035633.1-201ENST00000406139 838 ntBASIC19.25■□□□□ 0.67
DDX11Q96FC9 GPS2P2-201ENST00000430745 888 ntBASIC19.25■□□□□ 0.67
DDX11Q96FC9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX11Q96FC9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DDX11Q96FC9 LINC01225-203ENST00000563550 1244 ntBASIC19.25■□□□□ 0.67
DDX11Q96FC9 MIR4745-201ENST00000577608 62 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms