Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 RARRES2P8-201ENST00000566335 367 ntBASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 CDC14C-201ENST00000428251 1719 ntBASIC14.23□□□□□ -0.13
SPTSSAQ969W0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.23□□□□□ -0.13
SPTSSAQ969W0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 HAUS4P1-201ENST00000406739 1145 ntBASIC14.22□□□□□ -0.13
SPTSSAQ969W0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 AC007950.2-201ENST00000615045 2347 ntBASIC14.22□□□□□ -0.13
SPTSSAQ969W0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSAQ969W0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 AC069224.1-201ENST00000566372 1715 ntBASIC14.21□□□□□ -0.13
SPTSSAQ969W0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms