Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP6V0A1Q93050 AC009053.2-201ENST00000563701 2365 ntBASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 GNAQP1-201ENST00000444815 1067 ntBASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 ZNF890P-202ENST00000530367 1156 ntBASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 API5-211ENST00000534695 560 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 AL512361.1-201ENST00000554200 418 ntBASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP6V0A1Q93050 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 SPDYE17-201ENST00000412399 783 ntBASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 SERBP1P3-201ENST00000459980 809 ntBASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AC010336.2-201ENST00000564226 506 ntBASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AC104794.3-201ENST00000566840 1248 ntBASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 CU639417.3-201ENST00000624240 1404 ntBASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 AC006449.6-201ENST00000612330 2296 ntBASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP6V0A1Q93050 KRT8P12-202ENST00000472924 1397 ntBASIC18.04■□□□□ 0.48
ATP6V0A1Q93050 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms