Protein–RNA interactions for Protein: Q8WYL5

SSH1, Protein phosphatase Slingshot homolog 1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1Q8WYL5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSH1Q8WYL5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 AC004987.2-201ENST00000395959 1148 ntBASIC20.61■□□□□ 0.89
SSH1Q8WYL5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 AC092183.1-201ENST00000469884 875 ntBASIC20.61■□□□□ 0.89
SSH1Q8WYL5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 AC004449.1-201ENST00000564240 433 ntBASIC20.61■□□□□ 0.89
SSH1Q8WYL5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.61■□□□□ 0.89
SSH1Q8WYL5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 EEF1DP4-201ENST00000446006 880 ntBASIC20.6■□□□□ 0.89
SSH1Q8WYL5 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 AC051619.7-201ENST00000568314 623 ntBASIC20.6■□□□□ 0.89
SSH1Q8WYL5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSH1Q8WYL5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 PRAL-201ENST00000624952 3286 ntBASIC20.59■□□□□ 0.89
SSH1Q8WYL5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 AC015911.4-201ENST00000588022 1070 ntBASIC20.59■□□□□ 0.89
SSH1Q8WYL5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 AC026979.3-201ENST00000607315 403 ntBASIC20.59■□□□□ 0.89
SSH1Q8WYL5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSH1Q8WYL5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms