Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AL080243.2-201ENST00000418783 582 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 TMPRSS11CP-201ENST00000453277 683 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AL844908.2-201ENST00000609461 460 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AF228730.6-201ENST00000641497 218 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AC084121.3-201ENST00000641716 218 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AC105233.6-201ENST00000642093 218 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 LINC01144-201ENST00000626198 1710 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 AC087499.5-201ENST00000452760 1342 ntBASIC22.5■■□□□ 1.19
TMC1Q8TDI8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC22.5■■□□□ 1.19
TMC1Q8TDI8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AC009477.1-201ENST00000452936 217 ntBASIC22.49■■□□□ 1.19
TMC1Q8TDI8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AC008738.7-201ENST00000609744 511 ntBASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TMC1Q8TDI8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC22.48■■□□□ 1.19
TMC1Q8TDI8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms