Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 RNA5SP486-201ENST00000515961 83 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 YRDCP1-201ENST00000621419 643 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 AL390961.4-201ENST00000623958 2535 ntBASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.67□□□□□ -0.7
ALMS1Q8TCU4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 KRT18P66-201ENST00000452970 1269 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RPSAP36-202ENST00000494591 1261 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AC067852.2-201ENST00000590513 2313 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AL354989.2-201ENST00000435838 1540 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RNU1-114P-201ENST00000365297 166 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 IQSEC3P1-201ENST00000538799 536 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AP002490.2-201ENST00000524791 560 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 REXO1L1P-202ENST00000608646 1974 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AC068880.1-201ENST00000507289 2297 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 RPL13AP19-201ENST00000434320 584 ntBASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ALMS1Q8TCU4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AC073352.2-201ENST00000609385 439 ntBASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AC009053.2-201ENST00000563701 2365 ntBASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AL023775.1-201ENST00000454907 1746 ntBASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AC079178.1-201ENST00000420915 656 ntBASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms