Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC007191.1-201ENST00000623179 2995 ntBASIC14.87□□□□□ -0.03
CNIH3Q8TBE1 LINC00528-201ENST00000600723 2160 ntBASIC14.87□□□□□ -0.03
CNIH3Q8TBE1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CNIH3Q8TBE1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 AC087163.2-201ENST00000457299 853 ntBASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNIH3Q8TBE1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 AC233702.3-201ENST00000578656 1387 ntBASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 LINC01238-205ENST00000567549 1107 ntBASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 AC064862.7-201ENST00000604520 867 ntBASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 AC105250.1-201ENST00000509378 2057 ntBASIC14.85□□□□□ -0.03
CNIH3Q8TBE1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms