Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 AC026691.1-201ENST00000602502 2017 ntBASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHKBP1Q8TBC3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 AL353779.1-201ENST00000434793 351 ntBASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 AC026979.3-201ENST00000607315 403 ntBASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 KRT8P12-202ENST00000472924 1397 ntBASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.98■□□□□ 0.31
SHKBP1Q8TBC3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SPDYE17-201ENST00000412399 783 ntBASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 SERBP1P3-201ENST00000459980 809 ntBASIC16.97■□□□□ 0.31
SHKBP1Q8TBC3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms