Protein–RNA interactions for Protein: Q8NE01

CNNM3, Metal transporter CNNM3, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3Q8NE01 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNNM3Q8NE01 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 AC112504.1-201ENST00000623415 1841 ntBASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 AC112191.1-201ENST00000523689 701 ntBASIC18.52■□□□□ 0.56
CNNM3Q8NE01 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 AL596442.2-201ENST00000610240 980 ntBASIC18.52■□□□□ 0.56
CNNM3Q8NE01 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 AC091812.2-201ENST00000619081 385 ntBASIC18.52■□□□□ 0.56
CNNM3Q8NE01 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CNNM3Q8NE01 TSPY26P-202ENST00000565928 3884 ntBASIC18.52■□□□□ 0.55
CNNM3Q8NE01 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNNM3Q8NE01 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 PMS2P2-201ENST00000425039 1128 ntBASIC18.51■□□□□ 0.55
CNNM3Q8NE01 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 AL031432.2-201ENST00000566714 459 ntBASIC18.51■□□□□ 0.55
CNNM3Q8NE01 AL928711.1-201ENST00000570165 459 ntBASIC18.51■□□□□ 0.55
CNNM3Q8NE01 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNNM3Q8NE01 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNNM3Q8NE01 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNNM3Q8NE01 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.5■□□□□ 0.55
CNNM3Q8NE01 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNNM3Q8NE01 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms