Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KDM1BQ8NB78 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AC132872.4-202ENST00000622924 2756 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AC005052.1-201ENST00000625181 2492 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 SPDYE17-201ENST00000412399 783 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AC002472.2-201ENST00000442739 958 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 TERF1P3-201ENST00000505638 1227 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 RN7SL204P-201ENST00000582831 262 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AC138761.1-201ENST00000584393 385 ntBASIC16.52■□□□□ 0.24
KDM1BQ8NB78 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KDM1BQ8NB78 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 AL365203.3-201ENST00000609742 2057 ntBASIC16.52■□□□□ 0.23
KDM1BQ8NB78 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KDM1BQ8NB78 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AC022144.1-201ENST00000602255 1580 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 RPL37AP1-201ENST00000412502 279 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 MTND6P24-201ENST00000440466 518 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AC009477.1-201ENST00000452936 217 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 UGT1A2P-201ENST00000454886 866 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.51■□□□□ 0.23
KDM1BQ8NB78 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms