Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 FAM185BP-201ENST00000443595 716 ntBASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 AC093724.1-201ENST00000448659 1027 ntBASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 SAPCD2P3-201ENST00000455031 850 ntBASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 AP002469.2-201ENST00000531724 424 ntBASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 NORAD-201ENST00000565493 5339 ntBASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TSPY19P-201ENST00000418461 509 ntBASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 DUSP5P1-201ENST00000441325 1139 ntBASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TSPY18P-201ENST00000441642 509 ntBASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AC091304.2-201ENST00000564639 760 ntBASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 MIR3652-201ENST00000579335 131 ntBASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LINC01561Q8N1V8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms