Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 KRT223P-202ENST00000449164 1292 ntBASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 CROCCP4-201ENST00000457096 498 ntBASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 MIR6775-201ENST00000617557 69 ntBASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 RPSAP52-203ENST00000622976 1023 ntBASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AL033527.4-201ENST00000641026 673 ntBASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AC005915.1-201ENST00000624912 2018 ntBASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS3Q8IXF0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 RN7SL399P-201ENST00000471648 279 ntBASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 AC092658.1-201ENST00000505836 891 ntBASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 AC133552.6-201ENST00000613406 534 ntBASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS3Q8IXF0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 ANKRD19P-201ENST00000338192 862 ntBASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 AL158212.4-201ENST00000624062 1286 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms