Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFX6Q8HWS3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AC002056.1-201ENST00000395613 760 ntBASIC16.89■□□□□ 0.29
RFX6Q8HWS3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AL591424.1-201ENST00000442569 1213 ntBASIC16.89■□□□□ 0.29
RFX6Q8HWS3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 PRYP6-201ENST00000514804 343 ntBASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 PMS2P7-201ENST00000506558 1336 ntBASIC16.89■□□□□ 0.29
RFX6Q8HWS3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 AC067930.6-201ENST00000623257 4947 ntBASIC16.89■□□□□ 0.29
RFX6Q8HWS3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX6Q8HWS3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 AP005117.1-202ENST00000581724 1908 ntBASIC16.88■□□□□ 0.29
RFX6Q8HWS3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 AC112191.1-201ENST00000523689 701 ntBASIC16.88■□□□□ 0.29
RFX6Q8HWS3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX6Q8HWS3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX6Q8HWS3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.87■□□□□ 0.29
RFX6Q8HWS3 AC026396.1-201ENST00000419388 421 ntBASIC16.87■□□□□ 0.29
RFX6Q8HWS3 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms