Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 CDC14C-201ENST00000428251 1719 ntBASIC16.36■□□□□ 0.21
RAPH1Q70E73 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 EMBP1-201ENST00000458200 901 ntBASIC16.36■□□□□ 0.21
RAPH1Q70E73 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 AC012640.2-201ENST00000561606 901 ntBASIC16.36■□□□□ 0.21
RAPH1Q70E73 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 MIR4515-201ENST00000584082 81 ntBASIC16.36■□□□□ 0.21
RAPH1Q70E73 AL121912.1-201ENST00000603683 238 ntBASIC16.36■□□□□ 0.21
RAPH1Q70E73 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
RAPH1Q70E73 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAPH1Q70E73 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 KRT18P67-201ENST00000432816 1264 ntBASIC16.35■□□□□ 0.21
RAPH1Q70E73 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 AC018712.1-201ENST00000455767 687 ntBASIC16.35■□□□□ 0.21
RAPH1Q70E73 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 OR7E47P-204ENST00000575924 449 ntBASIC16.35■□□□□ 0.21
RAPH1Q70E73 MIR4751-201ENST00000578027 74 ntBASIC16.35■□□□□ 0.21
RAPH1Q70E73 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.35■□□□□ 0.21
RAPH1Q70E73 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAPH1Q70E73 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.34■□□□□ 0.21
RAPH1Q70E73 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAPH1Q70E73 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms