Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 AL135744.1-201ENST00000565098 629 ntBASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.69■□□□□ 0.1
NIPAL1Q6NVV3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 AC016027.1-202ENST00000607927 1699 ntBASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 AC004967.1-201ENST00000453589 447 ntBASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 POU5F1P6-201ENST00000466990 990 ntBASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 AC008267.7-201ENST00000624570 1194 ntBASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.68■□□□□ 0.1
NIPAL1Q6NVV3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 GGT3P-204ENST00000453783 1664 ntBASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NIPAL1Q6NVV3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms