Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC068587.10-201ENST00000641210 219 ntBASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.76■□□□□ 0.11
LYSMD4Q5XG99 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AC074338.1-201ENST00000416825 156 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 YBX1P6-201ENST00000442962 1002 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 PFN1P12-201ENST00000455938 534 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AC007551.1-201ENST00000457394 519 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AC124283.3-201ENST00000570869 594 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AC103810.3-201ENST00000583567 96 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 AC244093.1-201ENST00000610837 814 ntBASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD4Q5XG99 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 C1QBPP1-201ENST00000400117 770 ntBASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 HAUS4P1-201ENST00000406739 1145 ntBASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 POU5F1P6-201ENST00000466990 990 ntBASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AC099548.2-209ENST00000480264 625 ntBASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AP000812.2-201ENST00000538934 718 ntBASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD4Q5XG99 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms