Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.82■□□□□ 0.76
ATP2B3Q16720 RN7SL618P-201ENST00000477850 296 ntBASIC19.82■□□□□ 0.76
ATP2B3Q16720 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2B3Q16720 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2B3Q16720 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 CYP4F24P-201ENST00000586049 1580 ntBASIC19.82■□□□□ 0.76
ATP2B3Q16720 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2B3Q16720 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2B3Q16720 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2B3Q16720 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2B3Q16720 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SERBP1P3-201ENST00000459980 809 ntBASIC19.81■□□□□ 0.76
ATP2B3Q16720 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP2B3Q16720 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2B3Q16720 LINC02199-201ENST00000506655 2702 ntBASIC19.81■□□□□ 0.76
ATP2B3Q16720 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 AC245100.5-201ENST00000452108 331 ntBASIC19.8■□□□□ 0.76
ATP2B3Q16720 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 AC004840.1-201ENST00000636359 365 ntBASIC19.8■□□□□ 0.76
ATP2B3Q16720 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2B3Q16720 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2B3Q16720 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2B3Q16720 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.79■□□□□ 0.76
ATP2B3Q16720 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms