Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.59□□□□□ -0.07
VBP1P61758 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.59□□□□□ -0.07
VBP1P61758 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.59□□□□□ -0.07
VBP1P61758 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.59□□□□□ -0.07
VBP1P61758 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.59□□□□□ -0.07
VBP1P61758 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.59□□□□□ -0.07
VBP1P61758 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VBP1P61758 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VBP1P61758 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.59□□□□□ -0.07
VBP1P61758 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VBP1P61758 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VBP1P61758 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.59□□□□□ -0.07
VBP1P61758 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
VBP1P61758 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VBP1P61758 AC105250.1-201ENST00000509378 2057 ntBASIC14.59□□□□□ -0.07
VBP1P61758 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.59□□□□□ -0.07
VBP1P61758 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VBP1P61758 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
VBP1P61758 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VBP1P61758 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
VBP1P61758 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VBP1P61758 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.58□□□□□ -0.07
VBP1P61758 AL137784.3-201ENST00000623858 2288 ntBASIC14.58□□□□□ -0.08
VBP1P61758 CYP2D8P-201ENST00000433633 1490 ntBASIC14.58□□□□□ -0.08
VBP1P61758 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.58□□□□□ -0.08
VBP1P61758 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
VBP1P61758 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 SPDYE15P-201ENST00000424157 909 ntBASIC14.58□□□□□ -0.08
VBP1P61758 AC092597.1-201ENST00000487352 616 ntBASIC14.58□□□□□ -0.08
VBP1P61758 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 AC005336.2-201ENST00000593183 939 ntBASIC14.58□□□□□ -0.08
VBP1P61758 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.58□□□□□ -0.08
VBP1P61758 AL023973.1-201ENST00000624619 620 ntBASIC14.58□□□□□ -0.08
VBP1P61758 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.58□□□□□ -0.08
VBP1P61758 AC141257.4-201ENST00000634557 245 ntBASIC14.58□□□□□ -0.08
VBP1P61758 AC136944.6-201ENST00000634818 245 ntBASIC14.58□□□□□ -0.08
VBP1P61758 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VBP1P61758 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 TOP3BP1-201ENST00000420768 1380 ntBASIC14.58□□□□□ -0.08
VBP1P61758 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
VBP1P61758 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.58□□□□□ -0.08
VBP1P61758 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VBP1P61758 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
VBP1P61758 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VBP1P61758 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
VBP1P61758 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VBP1P61758 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.57□□□□□ -0.08
VBP1P61758 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms