Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS3AP61247 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS3AP61247 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS3AP61247 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS3AP61247 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS3AP61247 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RPS3AP61247 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS3AP61247 AL645728.1-201ENST00000366221 2101 ntBASIC15.28■□□□□ 0.04
RPS3AP61247 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 AC023908.3-201ENST00000564211 3047 ntBASIC15.27■□□□□ 0.04
RPS3AP61247 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 GRK6P1-201ENST00000400595 1711 ntBASIC15.27■□□□□ 0.04
RPS3AP61247 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS3AP61247 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.27■□□□□ 0.04
RPS3AP61247 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RPS3AP61247 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS3AP61247 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS3AP61247 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RPS3AP61247 AC026748.1-201ENST00000624349 3251 ntBASIC15.27■□□□□ 0.03
RPS3AP61247 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RPS3AP61247 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.27■□□□□ 0.03
RPS3AP61247 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.27■□□□□ 0.03
RPS3AP61247 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS3AP61247 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.26■□□□□ 0.03
RPS3AP61247 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RPS3AP61247 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 AL021920.2-201ENST00000624828 1351 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RPS3AP61247 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.26■□□□□ 0.03
RPS3AP61247 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.26■□□□□ 0.03
RPS3AP61247 BX842568.4-201ENST00000421222 227 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RPS3AP61247 DNAJB3-201ENST00000446806 729 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 PGAM5P1-201ENST00000518923 814 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.26■□□□□ 0.03
RPS3AP61247 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RPS3AP61247 AC092865.5-201ENST00000545435 363 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.26■□□□□ 0.03
RPS3AP61247 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 OR7E47P-204ENST00000575924 449 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 AC023141.13-201ENST00000604991 943 ntBASIC15.26■□□□□ 0.03
RPS3AP61247 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS3AP61247 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS3AP61247 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms