Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
EPHA4P54764 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHA4P54764 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.57■□□□□ 0.08
EPHA4P54764 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHA4P54764 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHA4P54764 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHA4P54764 NFIC-211ENST00000641145 8399 ntBASIC15.57■□□□□ 0.08
EPHA4P54764 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHA4P54764 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHA4P54764 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
EPHA4P54764 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 AC004987.2-201ENST00000395959 1148 ntBASIC15.56■□□□□ 0.08
EPHA4P54764 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 DFFBP1-201ENST00000433250 979 ntBASIC15.56■□□□□ 0.08
EPHA4P54764 AL353779.1-201ENST00000434793 351 ntBASIC15.56■□□□□ 0.08
EPHA4P54764 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.56■□□□□ 0.08
EPHA4P54764 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.56■□□□□ 0.08
EPHA4P54764 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.56■□□□□ 0.08
EPHA4P54764 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.56■□□□□ 0.08
EPHA4P54764 AL391825.1-201ENST00000457671 1364 ntBASIC15.56■□□□□ 0.08
EPHA4P54764 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
EPHA4P54764 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.56■□□□□ 0.08
EPHA4P54764 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHA4P54764 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHA4P54764 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
EPHA4P54764 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 AC063926.2-201ENST00000623766 1308 ntBASIC15.55■□□□□ 0.08
EPHA4P54764 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
EPHA4P54764 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 AC093004.1-201ENST00000508850 424 ntBASIC15.55■□□□□ 0.08
EPHA4P54764 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.55■□□□□ 0.08
EPHA4P54764 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.55■□□□□ 0.08
EPHA4P54764 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.55■□□□□ 0.08
EPHA4P54764 AC243562.2-201ENST00000561247 970 ntBASIC15.55■□□□□ 0.08
EPHA4P54764 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 AC104794.3-201ENST00000566840 1248 ntBASIC15.55■□□□□ 0.08
EPHA4P54764 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.55■□□□□ 0.08
EPHA4P54764 AL132655.2-201ENST00000596276 594 ntBASIC15.55■□□□□ 0.08
EPHA4P54764 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 AC025048.6-201ENST00000634326 1161 ntBASIC15.55■□□□□ 0.08
EPHA4P54764 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
EPHA4P54764 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
EPHA4P54764 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.55■□□□□ 0.08
EPHA4P54764 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
EPHA4P54764 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms