Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 AP002414.2-201ENST00000591780 3365 ntBASIC16.64■□□□□ 0.25
ATXN3P54252 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.64■□□□□ 0.25
ATXN3P54252 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.64■□□□□ 0.25
ATXN3P54252 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.64■□□□□ 0.25
ATXN3P54252 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.64■□□□□ 0.25
ATXN3P54252 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.64■□□□□ 0.25
ATXN3P54252 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.64■□□□□ 0.25
ATXN3P54252 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 AP005018.1-201ENST00000525475 301 ntBASIC16.64■□□□□ 0.25
ATXN3P54252 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ATXN3P54252 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
ATXN3P54252 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.64■□□□□ 0.25
ATXN3P54252 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.64■□□□□ 0.25
ATXN3P54252 AL359881.2-201ENST00000602973 570 ntBASIC16.64■□□□□ 0.25
ATXN3P54252 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.64■□□□□ 0.25
ATXN3P54252 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATXN3P54252 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 AC007950.2-201ENST00000615045 2347 ntBASIC16.64■□□□□ 0.25
ATXN3P54252 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.64■□□□□ 0.25
ATXN3P54252 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.64■□□□□ 0.25
ATXN3P54252 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.64■□□□□ 0.25
ATXN3P54252 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.64■□□□□ 0.25
ATXN3P54252 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATXN3P54252 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.64■□□□□ 0.25
ATXN3P54252 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATXN3P54252 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.63■□□□□ 0.25
ATXN3P54252 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 OR8S1-201ENST00000310194 1080 ntBASIC16.63■□□□□ 0.25
ATXN3P54252 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ATXN3P54252 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.63■□□□□ 0.25
ATXN3P54252 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 AC241585.1-201ENST00000433527 519 ntBASIC16.63■□□□□ 0.25
ATXN3P54252 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.63■□□□□ 0.25
ATXN3P54252 CR383656.12-201ENST00000549567 513 ntBASIC16.63■□□□□ 0.25
ATXN3P54252 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.63■□□□□ 0.25
ATXN3P54252 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.63■□□□□ 0.25
ATXN3P54252 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.63■□□□□ 0.25
ATXN3P54252 AC004233.3-201ENST00000607794 1269 ntBASIC16.63■□□□□ 0.25
ATXN3P54252 AL139327.4-201ENST00000612362 153 ntBASIC16.63■□□□□ 0.25
ATXN3P54252 AC009118.2-201ENST00000613275 655 ntBASIC16.63■□□□□ 0.25
ATXN3P54252 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.63■□□□□ 0.25
ATXN3P54252 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ATXN3P54252 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ATXN3P54252 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATXN3P54252 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.63■□□□□ 0.25
ATXN3P54252 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATXN3P54252 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 WASH6P-202ENST00000359512 1437 ntBASIC16.62■□□□□ 0.25
ATXN3P54252 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 LINC02012-201ENST00000608206 1725 ntBASIC16.62■□□□□ 0.25
ATXN3P54252 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.62■□□□□ 0.25
ATXN3P54252 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.62■□□□□ 0.25
ATXN3P54252 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
ATXN3P54252 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATXN3P54252 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 PIN1P1-201ENST00000412108 996 ntBASIC16.62■□□□□ 0.25
ATXN3P54252 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.62■□□□□ 0.25
ATXN3P54252 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.62■□□□□ 0.25
ATXN3P54252 ALG1L8P-201ENST00000533887 760 ntBASIC16.62■□□□□ 0.25
ATXN3P54252 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.62■□□□□ 0.25
ATXN3P54252 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.62■□□□□ 0.25
ATXN3P54252 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms