Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.18■□□□□ 0.18
NUBP1P53384 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.18■□□□□ 0.18
NUBP1P53384 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUBP1P53384 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NUBP1P53384 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 RNU2-72P-201ENST00000411175 163 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 FAM86LP-201ENST00000478302 853 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC16.17■□□□□ 0.18
NUBP1P53384 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC16.17■□□□□ 0.18
NUBP1P53384 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC16.17■□□□□ 0.18
NUBP1P53384 AL137802.2-201ENST00000562878 1110 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 AP001063.1-201ENST00000568332 529 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.17■□□□□ 0.18
NUBP1P53384 AC068137.4-201ENST00000638485 296 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.17■□□□□ 0.18
NUBP1P53384 AC098818.2-201ENST00000564925 2320 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUBP1P53384 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
NUBP1P53384 AC134312.5-201ENST00000568031 1313 ntBASIC16.17■□□□□ 0.18
NUBP1P53384 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.16■□□□□ 0.18
NUBP1P53384 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NUBP1P53384 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NUBP1P53384 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NUBP1P53384 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 CNN2P8-201ENST00000421872 913 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 AC006355.1-201ENST00000440982 1012 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.16■□□□□ 0.18
NUBP1P53384 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
NUBP1P53384 RPS3AP53-201ENST00000454716 778 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NUBP1P53384 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.16■□□□□ 0.18
NUBP1P53384 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.16■□□□□ 0.18
NUBP1P53384 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NUBP1P53384 AC124283.3-201ENST00000570869 594 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 U62317.3-201ENST00000608319 855 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.16■□□□□ 0.18
NUBP1P53384 MIR7845-201ENST00000618396 99 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 AL035425.4-201ENST00000624509 1063 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 AC138627.1-207ENST00000641560 1006 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NUBP1P53384 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.16■□□□□ 0.18
NUBP1P53384 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NUBP1P53384 AC108860.2-201ENST00000562760 2183 ntBASIC16.16■□□□□ 0.18
NUBP1P53384 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.16■□□□□ 0.18
NUBP1P53384 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUBP1P53384 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NUBP1P53384 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUBP1P53384 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms