Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CX3CR1P49238 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.3□□□□□ -0.12
CX3CR1P49238 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.3□□□□□ -0.12
CX3CR1P49238 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.3□□□□□ -0.12
CX3CR1P49238 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.3□□□□□ -0.12
CX3CR1P49238 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CX3CR1P49238 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 AC092919.2-201ENST00000623631 1645 ntBASIC14.3□□□□□ -0.12
CX3CR1P49238 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.29□□□□□ -0.12
CX3CR1P49238 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 AC007967.2-201ENST00000432613 625 ntBASIC14.29□□□□□ -0.12
CX3CR1P49238 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.29□□□□□ -0.12
CX3CR1P49238 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.29□□□□□ -0.12
CX3CR1P49238 AC018845.2-201ENST00000568326 409 ntBASIC14.29□□□□□ -0.12
CX3CR1P49238 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 AL078644.1-201ENST00000609881 752 ntBASIC14.29□□□□□ -0.12
CX3CR1P49238 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CX3CR1P49238 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 AC004877.2-201ENST00000623941 599 ntBASIC14.29□□□□□ -0.12
CX3CR1P49238 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.29□□□□□ -0.12
CX3CR1P49238 AC025580.3-201ENST00000617932 1424 ntBASIC14.29□□□□□ -0.12
CX3CR1P49238 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.29□□□□□ -0.12
CX3CR1P49238 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.29□□□□□ -0.12
CX3CR1P49238 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
CX3CR1P49238 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CX3CR1P49238 AC092384.3-202ENST00000564646 2873 ntBASIC14.28□□□□□ -0.12
CX3CR1P49238 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CX3CR1P49238 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms