Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
MMP13P45452 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 CDC14C-201ENST00000428251 1719 ntBASIC16.88■□□□□ 0.29
MMP13P45452 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
MMP13P45452 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
MMP13P45452 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.88■□□□□ 0.29
MMP13P45452 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.88■□□□□ 0.29
MMP13P45452 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.88■□□□□ 0.29
MMP13P45452 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.88■□□□□ 0.29
MMP13P45452 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 MTDHP5-201ENST00000598980 586 ntBASIC16.88■□□□□ 0.29
MMP13P45452 AL161645.1-201ENST00000622716 1255 ntBASIC16.88■□□□□ 0.29
MMP13P45452 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MMP13P45452 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 PCGF3-213ENST00000620529 1899 ntBASIC16.88■□□□□ 0.29
MMP13P45452 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.88■□□□□ 0.29
MMP13P45452 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.88■□□□□ 0.29
MMP13P45452 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MMP13P45452 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 LINC02447-202ENST00000501888 2146 ntBASIC16.87■□□□□ 0.29
MMP13P45452 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 FAM58CP-201ENST00000435741 640 ntBASIC16.87■□□□□ 0.29
MMP13P45452 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.87■□□□□ 0.29
MMP13P45452 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.87■□□□□ 0.29
MMP13P45452 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.87■□□□□ 0.29
MMP13P45452 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MMP13P45452 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP13P45452 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP13P45452 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP13P45452 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
MMP13P45452 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 YBX2P1-201ENST00000394192 760 ntBASIC16.86■□□□□ 0.29
MMP13P45452 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.86■□□□□ 0.29
MMP13P45452 POU5F1P6-201ENST00000466990 990 ntBASIC16.86■□□□□ 0.29
MMP13P45452 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.86■□□□□ 0.29
MMP13P45452 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.86■□□□□ 0.29
MMP13P45452 AC099522.2-201ENST00000607001 744 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms