Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LMO1P25800 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LMO1P25800 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LMO1P25800 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LMO1P25800 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LMO1P25800 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LMO1P25800 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 AC073347.1-201ENST00000421633 2643 ntBASIC13.62□□□□□ -0.23
LMO1P25800 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO1P25800 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 MCCD1P2-201ENST00000423228 335 ntBASIC13.62□□□□□ -0.23
LMO1P25800 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 AC098859.1-201ENST00000502915 1238 ntBASIC13.62□□□□□ -0.23
LMO1P25800 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.62□□□□□ -0.23
LMO1P25800 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.62□□□□□ -0.23
LMO1P25800 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.62□□□□□ -0.23
LMO1P25800 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LMO1P25800 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LMO1P25800 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.62□□□□□ -0.23
LMO1P25800 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.62□□□□□ -0.23
LMO1P25800 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
LMO1P25800 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LMO1P25800 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.62□□□□□ -0.23
LMO1P25800 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LMO1P25800 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LMO1P25800 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LMO1P25800 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
LMO1P25800 AP005117.1-202ENST00000581724 1908 ntBASIC13.61□□□□□ -0.23
LMO1P25800 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.61□□□□□ -0.23
LMO1P25800 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
LMO1P25800 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LMO1P25800 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 AL671277.1-201ENST00000429656 993 ntBASIC13.61□□□□□ -0.23
LMO1P25800 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.61□□□□□ -0.23
LMO1P25800 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.61□□□□□ -0.23
LMO1P25800 AC105233.2-201ENST00000523697 349 ntBASIC13.61□□□□□ -0.23
LMO1P25800 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 AF228730.5-201ENST00000530288 346 ntBASIC13.61□□□□□ -0.23
LMO1P25800 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.61□□□□□ -0.23
LMO1P25800 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.61□□□□□ -0.23
LMO1P25800 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.61□□□□□ -0.23
LMO1P25800 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LMO1P25800 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LMO1P25800 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LMO1P25800 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.6□□□□□ -0.23
LMO1P25800 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LMO1P25800 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.6□□□□□ -0.23
LMO1P25800 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms