Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC022532.1-201ENST00000624563 1728 ntBASIC15.21■□□□□ 0.03
CHMP24386 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
CHMP24386 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP24386 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CHMP24386 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP24386 ACTG1P14-201ENST00000446382 1122 ntBASIC15.21■□□□□ 0.03
CHMP24386 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.21■□□□□ 0.03
CHMP24386 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.21■□□□□ 0.03
CHMP24386 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
CHMP24386 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.21■□□□□ 0.03
CHMP24386 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 AC087641.1-201ENST00000557561 1021 ntBASIC15.21■□□□□ 0.03
CHMP24386 MPDU1-223ENST00000582151 728 ntBASIC15.21■□□□□ 0.03
CHMP24386 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.21■□□□□ 0.03
CHMP24386 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP24386 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP24386 AL691403.2-201ENST00000618460 490 ntBASIC15.21■□□□□ 0.03
CHMP24386 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP24386 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.21■□□□□ 0.02
CHMP24386 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CHMP24386 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
CHMP24386 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP24386 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP24386 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CHMP24386 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP24386 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP24386 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP24386 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP24386 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP24386 KRT8P39-201ENST00000396270 1433 ntBASIC15.2■□□□□ 0.02
CHMP24386 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHMP24386 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 AC211486.1-202ENST00000416371 468 ntBASIC15.2■□□□□ 0.02
CHMP24386 HTR5BP-201ENST00000430851 1154 ntBASIC15.2■□□□□ 0.02
CHMP24386 AC140658.5-201ENST00000438532 169 ntBASIC15.2■□□□□ 0.02
CHMP24386 AC004967.1-201ENST00000453589 447 ntBASIC15.2■□□□□ 0.02
CHMP24386 AC211476.1-201ENST00000503899 468 ntBASIC15.2■□□□□ 0.02
CHMP24386 YBX1P5-201ENST00000509441 847 ntBASIC15.2■□□□□ 0.02
CHMP24386 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP24386 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.2■□□□□ 0.02
CHMP24386 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP24386 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP24386 REXO1L8P-201ENST00000604378 1897 ntBASIC15.2■□□□□ 0.02
CHMP24386 AC099063.4-201ENST00000641099 1602 ntBASIC15.2■□□□□ 0.02
CHMP24386 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 AC131009.4-201ENST00000624048 1740 ntBASIC15.2■□□□□ 0.02
CHMP24386 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CHMP24386 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP24386 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CHMP24386 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms