Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.91□□□□□ -0.18
TNFSF4P23510 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.91□□□□□ -0.18
TNFSF4P23510 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TNFSF4P23510 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TNFSF4P23510 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.9□□□□□ -0.18
TNFSF4P23510 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 ALG1L8P-201ENST00000533887 760 ntBASIC13.9□□□□□ -0.18
TNFSF4P23510 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.9□□□□□ -0.18
TNFSF4P23510 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.9□□□□□ -0.18
TNFSF4P23510 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 LINC00628-201ENST00000628516 1289 ntBASIC13.9□□□□□ -0.18
TNFSF4P23510 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TNFSF4P23510 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFSF4P23510 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFSF4P23510 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TNFSF4P23510 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
TNFSF4P23510 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.19
TNFSF4P23510 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
TNFSF4P23510 KRT18P28-201ENST00000453838 1332 ntBASIC13.9□□□□□ -0.19
TNFSF4P23510 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 ME2P1-201ENST00000426028 1970 ntBASIC13.89□□□□□ -0.19
TNFSF4P23510 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms